Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm10020-201ENSMUST00000081993 612 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm10263-201ENSMUST00000085163 300 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim9Q8C7M3 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm28032-201ENSMUST00000184104 96 ntBASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm43163-201ENSMUST00000196571 442 ntBASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm43520-201ENSMUST00000197996 164 ntBASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm43138-201ENSMUST00000199123 708 ntBASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.29□□□□□ -0.44
Trim9Q8C7M3 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim9Q8C7M3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm13284-201ENSMUST00000121020 547 ntBASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm17391-201ENSMUST00000171036 126 ntBASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm23771-201ENSMUST00000178702 110 ntBASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms