Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.39□□□□□ -0.43
Usp6nlQ80XC3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gm25998-201ENSMUST00000175397 53 ntBASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 BC080696-201ENSMUST00000202858 1218 ntBASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gm8894-201ENSMUST00000074642 666 ntBASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp6nlQ80XC3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm12986-201ENSMUST00000119037 967 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm25604-201ENSMUST00000158359 133 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm23647-201ENSMUST00000175042 109 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm26119-201ENSMUST00000175601 104 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm27956-201ENSMUST00000175604 260 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Rn5s-201ENSMUST00000177555 119 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm22109-201ENSMUST00000177995 119 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm22291-201ENSMUST00000178027 119 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 Gm23284-201ENSMUST00000178069 119 ntBASIC12.37□□□□□ -0.43
Usp6nlQ80XC3 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms