Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 AC129597.1-201ENSMUST00000223046 1234 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 AC154252.1-201ENSMUST00000226041 473 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm8894-201ENSMUST00000074642 666 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm7536-201ENSMUST00000077389 444 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm5453-201ENSMUST00000080866 447 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Clcn1Q64347 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm44863-201ENSMUST00000207613 1422 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm10686-201ENSMUST00000215389 3247 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Clcn1Q64347 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 Gm5124-202ENSMUST00000132683 2083 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clcn1Q64347 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.29□□□□□ -0.12
Clcn1Q64347 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.29□□□□□ -0.12
Clcn1Q64347 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Gm12389-201ENSMUST00000117696 418 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 Gm3828-201ENSMUST00000121817 257 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Gm25604-201ENSMUST00000158359 133 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Olfml3-204ENSMUST00000169286 874 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Gm8679-201ENSMUST00000210651 1036 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.28□□□□□ -0.12
Clcn1Q64347 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 AC159195.3-201ENSMUST00000225162 2211 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.28□□□□□ -0.12
Clcn1Q64347 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Clcn1Q64347 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clcn1Q64347 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Clcn1Q64347 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Clcn1Q64347 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.27□□□□□ -0.12
Clcn1Q64347 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clcn1Q64347 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.27□□□□□ -0.12
Clcn1Q64347 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clcn1Q64347 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Clcn1Q64347 Gm14659-201ENSMUST00000117667 843 ntBASIC14.27□□□□□ -0.13
Clcn1Q64347 Gm5970-201ENSMUST00000131638 1216 ntBASIC14.27□□□□□ -0.13
Clcn1Q64347 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.27□□□□□ -0.13
Clcn1Q64347 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.27□□□□□ -0.13
Clcn1Q64347 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms