Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ift88Q61371 Gm7741-201ENSMUST00000181445 989 ntBASIC12.33□□□□□ -0.44
Ift88Q61371 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Gm9540-201ENSMUST00000188230 478 ntBASIC12.33□□□□□ -0.44
Ift88Q61371 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.33□□□□□ -0.44
Ift88Q61371 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.33□□□□□ -0.44
Ift88Q61371 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ift88Q61371 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.33□□□□□ -0.44
Ift88Q61371 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.33□□□□□ -0.44
Ift88Q61371 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ift88Q61371 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.33□□□□□ -0.44
Ift88Q61371 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.33□□□□□ -0.44
Ift88Q61371 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ift88Q61371 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ift88Q61371 Gm4294-201ENSMUST00000105169 614 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Gm15515-201ENSMUST00000117827 822 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 Gm14208-201ENSMUST00000119645 678 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.32□□□□□ -0.44
Ift88Q61371 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.32□□□□□ -0.44
Ift88Q61371 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.32□□□□□ -0.44
Ift88Q61371 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ift88Q61371 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ift88Q61371 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.31□□□□□ -0.44
Ift88Q61371 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.31□□□□□ -0.44
Ift88Q61371 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.31□□□□□ -0.44
Ift88Q61371 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.31□□□□□ -0.44
Ift88Q61371 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Gm26083-201ENSMUST00000157904 193 ntBASIC12.31□□□□□ -0.44
Ift88Q61371 Gm24844-201ENSMUST00000158679 127 ntBASIC12.31□□□□□ -0.44
Ift88Q61371 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ift88Q61371 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.31□□□□□ -0.44
Ift88Q61371 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.31□□□□□ -0.44
Ift88Q61371 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Gm37301-201ENSMUST00000195412 568 ntBASIC12.31□□□□□ -0.44
Ift88Q61371 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.31□□□□□ -0.44
Ift88Q61371 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.31□□□□□ -0.44
Ift88Q61371 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.31□□□□□ -0.44
Ift88Q61371 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Ift88Q61371 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ift88Q61371 AA474408-201ENSMUST00000098110 3339 ntBASIC12.31□□□□□ -0.44
Ift88Q61371 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.3□□□□□ -0.44
Ift88Q61371 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ift88Q61371 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms