Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm24335-201ENSMUST00000104211 132 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm12221-201ENSMUST00000125096 1131 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Ly6c1-205ENSMUST00000187347 522 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm29572-201ENSMUST00000190305 283 ntTSL 5 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 AC138667.1-201ENSMUST00000225472 316 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm14267-205ENSMUST00000226697 1299 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 1810011H11Rik-202ENSMUST00000227060 496 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 2310034C09Rik-201ENSMUST00000089111 946 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm5421-201ENSMUST00000181698 2354 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Ggta1-209ENSMUST00000164889 1185 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm43246-201ENSMUST00000197597 564 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm29961-202ENSMUST00000215431 637 ntTSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Olfr323-203ENSMUST00000214132 1916 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 1110019D14Rik-202ENSMUST00000181225 1499 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm5054-201ENSMUST00000119351 453 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm15798-201ENSMUST00000120082 408 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm22881-201ENSMUST00000157747 134 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm42538-202ENSMUST00000199431 358 ntTSL 3 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm38430-201ENSMUST00000209888 1240 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm18641-201ENSMUST00000211763 1246 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 1700001L19Rik-202ENSMUST00000222604 780 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 AC134869.2-201ENSMUST00000225788 421 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 AC160550.2-202ENSMUST00000227812 1861 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Depdc1b-205ENSMUST00000171178 1404 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 AC100729.1-201ENSMUST00000225458 1454 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm26356-201ENSMUST00000158217 283 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm43628-201ENSMUST00000197871 1187 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm18471-201ENSMUST00000208272 452 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm11567-201ENSMUST00000078442 1043 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Als2cr12-201ENSMUST00000055313 1540 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ush2AQ2QI47 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms