Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 AC154257.1-202ENSMUST00000224729 843 ntBASIC8.68□□□□□ -1.02
Cdx4Q07424 AC171241.1-201ENSMUST00000228144 1166 ntBASIC8.68□□□□□ -1.02
Cdx4Q07424 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC8.68□□□□□ -1.02
Cdx4Q07424 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Gm9466-201ENSMUST00000218144 2246 ntBASIC8.68□□□□□ -1.02
Cdx4Q07424 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm6485-201ENSMUST00000160676 439 ntBASIC8.67□□□□□ -1.02
Cdx4Q07424 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm36940-201ENSMUST00000194281 2036 ntBASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm38314-201ENSMUST00000195709 625 ntBASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm5982-201ENSMUST00000196234 512 ntBASIC8.67□□□□□ -1.02
Cdx4Q07424 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm6560-201ENSMUST00000198588 1591 ntBASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm18198-201ENSMUST00000204986 1551 ntBASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm44999-201ENSMUST00000207456 1493 ntBASIC8.67□□□□□ -1.02
Cdx4Q07424 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC8.67□□□□□ -1.02
Cdx4Q07424 AC122350.1-201ENSMUST00000228135 533 ntBASIC8.67□□□□□ -1.02
Cdx4Q07424 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cdx4Q07424 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cdx4Q07424 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Gm19040-201ENSMUST00000203280 4726 ntBASIC8.66□□□□□ -1.02
Cdx4Q07424 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Cdx4Q07424 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC8.66□□□□□ -1.02
Cdx4Q07424 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cdx4Q07424 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms