Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.66□□□□□ -0.38
GabpaQ00422 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
GabpaQ00422 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.66□□□□□ -0.38
GabpaQ00422 Gm18014-201ENSMUST00000183369 817 ntBASIC12.66□□□□□ -0.38
GabpaQ00422 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.66□□□□□ -0.38
GabpaQ00422 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
GabpaQ00422 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Gm7880-201ENSMUST00000203748 871 ntBASIC12.66□□□□□ -0.38
GabpaQ00422 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.66□□□□□ -0.38
GabpaQ00422 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.66□□□□□ -0.38
GabpaQ00422 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
GabpaQ00422 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
GabpaQ00422 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GabpaQ00422 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GabpaQ00422 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.65□□□□□ -0.38
GabpaQ00422 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.65□□□□□ -0.38
GabpaQ00422 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Gm14592-201ENSMUST00000117201 560 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Gm15036-201ENSMUST00000118880 400 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Gm26272-201ENSMUST00000179241 132 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Mir6941-201ENSMUST00000184711 59 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Gm42433-201ENSMUST00000196806 940 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.65□□□□□ -0.38
GabpaQ00422 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GabpaQ00422 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.65□□□□□ -0.38
GabpaQ00422 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GabpaQ00422 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GabpaQ00422 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GabpaQ00422 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GabpaQ00422 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GabpaQ00422 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.65□□□□□ -0.38
GabpaQ00422 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
GabpaQ00422 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
GabpaQ00422 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
GabpaQ00422 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
GabpaQ00422 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
GabpaQ00422 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.65□□□□□ -0.39
GabpaQ00422 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GabpaQ00422 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GabpaQ00422 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
GabpaQ00422 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GabpaQ00422 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.64□□□□□ -0.39
GabpaQ00422 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GabpaQ00422 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GabpaQ00422 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms