Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.98□□□□□ -0.81
H3f3aP84244 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
H3f3aP84244 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
H3f3aP84244 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H3f3aP84244 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H3f3aP84244 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
H3f3aP84244 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
H3f3aP84244 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.98□□□□□ -0.81
H3f3aP84244 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
H3f3aP84244 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H3f3aP84244 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
H3f3aP84244 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
H3f3aP84244 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.97□□□□□ -0.81
H3f3aP84244 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
H3f3aP84244 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.97□□□□□ -0.81
H3f3aP84244 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.97□□□□□ -0.81
H3f3aP84244 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
H3f3aP84244 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.97□□□□□ -0.81
H3f3aP84244 Gm14460-201ENSMUST00000121511 639 ntBASIC9.97□□□□□ -0.81
H3f3aP84244 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
H3f3aP84244 Mir7076-201ENSMUST00000183519 74 ntBASIC9.97□□□□□ -0.81
H3f3aP84244 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.97□□□□□ -0.81
H3f3aP84244 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC9.97□□□□□ -0.81
H3f3aP84244 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.97□□□□□ -0.81
H3f3aP84244 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.97□□□□□ -0.81
H3f3aP84244 Gm9661-201ENSMUST00000221611 1122 ntBASIC9.97□□□□□ -0.81
H3f3aP84244 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Gm10263-201ENSMUST00000085163 300 ntBASIC9.97□□□□□ -0.81
H3f3aP84244 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.97□□□□□ -0.81
H3f3aP84244 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.97□□□□□ -0.81
H3f3aP84244 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.97□□□□□ -0.81
H3f3aP84244 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.97□□□□□ -0.81
H3f3aP84244 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
H3f3aP84244 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
H3f3aP84244 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.97□□□□□ -0.81
H3f3aP84244 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
H3f3aP84244 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
H3f3aP84244 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.96□□□□□ -0.81
H3f3aP84244 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.96□□□□□ -0.81
H3f3aP84244 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
H3f3aP84244 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
H3f3aP84244 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
H3f3aP84244 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
H3f3aP84244 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
H3f3aP84244 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
H3f3aP84244 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
H3f3aP84244 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC9.96□□□□□ -0.82
H3f3aP84244 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.96□□□□□ -0.82
H3f3aP84244 Gm22334-201ENSMUST00000158070 133 ntBASIC9.96□□□□□ -0.82
H3f3aP84244 Gm22138-201ENSMUST00000158748 128 ntBASIC9.96□□□□□ -0.82
H3f3aP84244 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.96□□□□□ -0.82
H3f3aP84244 Gm43163-201ENSMUST00000196571 442 ntBASIC9.96□□□□□ -0.82
H3f3aP84244 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.96□□□□□ -0.82
H3f3aP84244 Gm8285-201ENSMUST00000208293 759 ntBASIC9.96□□□□□ -0.82
H3f3aP84244 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.96□□□□□ -0.82
H3f3aP84244 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H3f3aP84244 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
H3f3aP84244 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
H3f3aP84244 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms