Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Cux2P70298 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cux2P70298 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cux2P70298 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC17.97■□□□□ 0.47
Cux2P70298 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cux2P70298 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Gm13169-201ENSMUST00000122090 1459 ntBASIC17.97■□□□□ 0.47
Cux2P70298 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cux2P70298 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC17.97■□□□□ 0.47
Cux2P70298 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Gm3052-201ENSMUST00000186409 829 ntBASIC17.97■□□□□ 0.47
Cux2P70298 Gm43103-201ENSMUST00000199021 802 ntBASIC17.97■□□□□ 0.47
Cux2P70298 Gm30652-201ENSMUST00000199103 430 ntBASIC17.97■□□□□ 0.47
Cux2P70298 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Gm19228-201ENSMUST00000214030 717 ntBASIC17.97■□□□□ 0.47
Cux2P70298 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC17.97■□□□□ 0.47
Cux2P70298 Gm18749-201ENSMUST00000222410 692 ntBASIC17.97■□□□□ 0.47
Cux2P70298 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC17.97■□□□□ 0.47
Cux2P70298 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cux2P70298 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cux2P70298 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC17.96■□□□□ 0.47
Cux2P70298 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cux2P70298 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Cux2P70298 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Gm12774-201ENSMUST00000117881 416 ntBASIC17.96■□□□□ 0.47
Cux2P70298 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC17.96■□□□□ 0.47
Cux2P70298 Gm13898-201ENSMUST00000141865 610 ntBASIC17.96■□□□□ 0.47
Cux2P70298 Gm23555-201ENSMUST00000157815 135 ntBASIC17.96■□□□□ 0.47
Cux2P70298 Gm28746-201ENSMUST00000187453 380 ntBASIC17.96■□□□□ 0.47
Cux2P70298 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC17.96■□□□□ 0.47
Cux2P70298 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC17.96■□□□□ 0.47
Cux2P70298 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC17.96■□□□□ 0.47
Cux2P70298 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cux2P70298 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cux2P70298 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cux2P70298 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cux2P70298 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cux2P70298 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC17.95■□□□□ 0.46
Cux2P70298 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cux2P70298 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cux2P70298 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC17.95■□□□□ 0.46
Cux2P70298 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC17.95■□□□□ 0.46
Cux2P70298 Gm8163-201ENSMUST00000122020 1060 ntBASIC17.95■□□□□ 0.46
Cux2P70298 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC17.95■□□□□ 0.46
Cux2P70298 Gm6425-201ENSMUST00000136332 790 ntBASIC17.95■□□□□ 0.46
Cux2P70298 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC17.95■□□□□ 0.46
Cux2P70298 Gm24466-201ENSMUST00000179978 109 ntBASIC17.95■□□□□ 0.46
Cux2P70298 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC17.95■□□□□ 0.46
Cux2P70298 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cux2P70298 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cux2P70298 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Cux2P70298 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cux2P70298 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cux2P70298 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cux2P70298 Gm44664-201ENSMUST00000206841 1786 ntBASIC17.94■□□□□ 0.46
Cux2P70298 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cux2P70298 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC17.94■□□□□ 0.46
Cux2P70298 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cux2P70298 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cux2P70298 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cux2P70298 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms