Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Lsm6P62313 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lsm6P62313 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.83□□□□□ -0.84
Lsm6P62313 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Lsm6P62313 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Lsm6P62313 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Lsm6P62313 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Gm23272-201ENSMUST00000104053 129 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.83□□□□□ -0.84
Lsm6P62313 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Mir5120-201ENSMUST00000175020 78 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.83□□□□□ -0.84
Lsm6P62313 Gm44315-201ENSMUST00000203041 219 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Lsm6P62313 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Lsm6P62313 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.83□□□□□ -0.84
Lsm6P62313 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lsm6P62313 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.83□□□□□ -0.84
Lsm6P62313 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Lsm6P62313 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Lsm6P62313 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Lsm6P62313 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Gm11573-201ENSMUST00000119956 394 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.82□□□□□ -0.84
Lsm6P62313 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm4726-201ENSMUST00000135604 736 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.82□□□□□ -0.84
Lsm6P62313 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm6019-201ENSMUST00000148369 736 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm24992-201ENSMUST00000157412 130 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Lsm6P62313 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Lsm6P62313 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Mir7051-201ENSMUST00000184167 73 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Gm45398-201ENSMUST00000210561 165 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm5468-202ENSMUST00000227851 682 ntBASIC9.82□□□□□ -0.84
Lsm6P62313 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Lsm6P62313 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Lsm6P62313 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Lsm6P62313 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Lsm6P62313 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms