Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Lsm3P62311 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Lsm3P62311 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm3P62311 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC10.09□□□□□ -0.79
Lsm3P62311 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm3P62311 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Lsm3P62311 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm3P62311 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm3P62311 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.09□□□□□ -0.79
Lsm3P62311 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm3P62311 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.09□□□□□ -0.79
Lsm3P62311 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm3P62311 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lsm3P62311 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.08□□□□□ -0.8
Lsm3P62311 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Gm23061-201ENSMUST00000102348 116 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.08□□□□□ -0.8
Lsm3P62311 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.08□□□□□ -0.8
Lsm3P62311 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.08□□□□□ -0.8
Lsm3P62311 Gm27839-201ENSMUST00000184242 106 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 Mir8093-201ENSMUST00000185043 137 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Gm7561-201ENSMUST00000211203 886 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.08□□□□□ -0.8
Lsm3P62311 Gm16478-201ENSMUST00000208113 5084 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.08□□□□□ -0.8
Lsm3P62311 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Lsm3P62311 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.08□□□□□ -0.8
Lsm3P62311 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Gm10748-202ENSMUST00000194396 2379 ntBASIC10.08□□□□□ -0.8
Lsm3P62311 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lsm3P62311 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Lsm3P62311 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.07□□□□□ -0.8
Lsm3P62311 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.07□□□□□ -0.8
Lsm3P62311 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Lsm3P62311 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.07□□□□□ -0.8
Lsm3P62311 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.07□□□□□ -0.8
Lsm3P62311 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.07□□□□□ -0.8
Lsm3P62311 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.07□□□□□ -0.8
Lsm3P62311 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 Gm9353-201ENSMUST00000200472 604 ntBASIC10.07□□□□□ -0.8
Lsm3P62311 Rps4l-202ENSMUST00000204242 789 ntBASIC10.07□□□□□ -0.8
Lsm3P62311 Gm6180-201ENSMUST00000065243 498 ntBASIC10.07□□□□□ -0.8
Lsm3P62311 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Lsm3P62311 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.07□□□□□ -0.8
Lsm3P62311 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Lsm3P62311 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms