Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.44□□□□□ -0.42
Tpm1P58771 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.44□□□□□ -0.42
Tpm1P58771 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Tpm1P58771 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Tpm1P58771 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Tpm1P58771 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tpm1P58771 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Rims2-204ENSMUST00000226410 3685 ntBASIC12.43□□□□□ -0.42
Tpm1P58771 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Tpm1P58771 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC12.43□□□□□ -0.42
Tpm1P58771 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Tpm1P58771 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.43□□□□□ -0.42
Tpm1P58771 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.43□□□□□ -0.42
Tpm1P58771 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.43□□□□□ -0.42
Tpm1P58771 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.43□□□□□ -0.42
Tpm1P58771 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.43□□□□□ -0.42
Tpm1P58771 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.43□□□□□ -0.42
Tpm1P58771 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Tpm1P58771 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.43□□□□□ -0.42
Tpm1P58771 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Tpm1P58771 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.43□□□□□ -0.42
Tpm1P58771 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC12.43□□□□□ -0.42
Tpm1P58771 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tpm1P58771 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Tpm1P58771 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tpm1P58771 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Tpm1P58771 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.42□□□□□ -0.42
Tpm1P58771 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tpm1P58771 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.42□□□□□ -0.42
Tpm1P58771 Gm7150-201ENSMUST00000122032 981 ntBASIC12.42□□□□□ -0.42
Tpm1P58771 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.42□□□□□ -0.42
Tpm1P58771 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.42□□□□□ -0.42
Tpm1P58771 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Gm27501-201ENSMUST00000183599 107 ntBASIC12.42□□□□□ -0.42
Tpm1P58771 Gm28686-201ENSMUST00000187404 609 ntBASIC12.42□□□□□ -0.42
Tpm1P58771 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.42□□□□□ -0.42
Tpm1P58771 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.42□□□□□ -0.42
Tpm1P58771 Gm26448-201ENSMUST00000082446 203 ntBASIC12.42□□□□□ -0.42
Tpm1P58771 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tpm1P58771 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tpm1P58771 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tpm1P58771 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Tpm1P58771 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tpm1P58771 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.42□□□□□ -0.42
Tpm1P58771 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tpm1P58771 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms