Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Atxn1P54254 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.16□□□□□ -0.62
Atxn1P54254 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Atxn1P54254 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Atxn1P54254 Gm23745-201ENSMUST00000104230 125 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Gm23769-201ENSMUST00000104441 121 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Atxn1P54254 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Gm14395-201ENSMUST00000120494 563 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.16□□□□□ -0.62
Atxn1P54254 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.16□□□□□ -0.62
Atxn1P54254 Gm5706-201ENSMUST00000181525 993 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
Atxn1P54254 Gm33707-201ENSMUST00000195135 569 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Gm2594-201ENSMUST00000214774 742 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Gm9487-201ENSMUST00000216600 472 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.16□□□□□ -0.62
Atxn1P54254 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.16□□□□□ -0.62
Atxn1P54254 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Atxn1P54254 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Atxn1P54254 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.16□□□□□ -0.62
Atxn1P54254 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.16□□□□□ -0.62
Atxn1P54254 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Atxn1P54254 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Atxn1P54254 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.16□□□□□ -0.62
Atxn1P54254 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atxn1P54254 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Atxn1P54254 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Atxn1P54254 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Atxn1P54254 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Atxn1P54254 Gm13171-201ENSMUST00000117233 391 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Gm12986-201ENSMUST00000119037 967 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Gm11993-201ENSMUST00000121861 820 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.15□□□□□ -0.62
Atxn1P54254 Gm17221-201ENSMUST00000163909 481 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Gm17073-201ENSMUST00000168069 556 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Gm10807-201ENSMUST00000177134 795 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC11.15□□□□□ -0.62
Atxn1P54254 Gm8197-202ENSMUST00000193422 934 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Gm43249-201ENSMUST00000200464 458 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.15□□□□□ -0.62
Atxn1P54254 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.15□□□□□ -0.62
Atxn1P54254 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Atxn1P54254 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Gm6564-201ENSMUST00000075377 619 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Gm5449-201ENSMUST00000081132 357 ntBASIC11.15□□□□□ -0.62
Atxn1P54254 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Atxn1P54254 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atxn1P54254 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Atxn1P54254 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Atxn1P54254 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Atxn1P54254 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Atxn1P54254 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Atxn1P54254 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms