Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Gm11380-201ENSMUST00000118067 560 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Gm12072-201ENSMUST00000118293 715 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Gm15793-201ENSMUST00000121857 495 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Gm13366-201ENSMUST00000122198 970 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox1P53783 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox1P53783 Mir8091-201ENSMUST00000183602 139 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Mir6396-201ENSMUST00000183603 111 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sox1P53783 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox1P53783 Gm45258-201ENSMUST00000210042 853 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox1P53783 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox1P53783 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.47□□□□□ -0.57
Sox1P53783 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox1P53783 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sox1P53783 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox1P53783 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox1P53783 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sox1P53783 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox1P53783 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox1P53783 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Sox1P53783 Gm14667-201ENSMUST00000119448 1350 ntBASIC11.46□□□□□ -0.57
Sox1P53783 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Gm14148-201ENSMUST00000122433 1008 ntBASIC11.46□□□□□ -0.57
Sox1P53783 Gm9578-201ENSMUST00000182354 753 ntBASIC11.46□□□□□ -0.57
Sox1P53783 Gm18014-201ENSMUST00000183369 817 ntBASIC11.46□□□□□ -0.57
Sox1P53783 Gm6546-201ENSMUST00000192096 766 ntBASIC11.46□□□□□ -0.57
Sox1P53783 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.46□□□□□ -0.57
Sox1P53783 Gm18504-201ENSMUST00000220917 929 ntBASIC11.46□□□□□ -0.57
Sox1P53783 CU025215.1-201ENSMUST00000222986 603 ntBASIC11.46□□□□□ -0.57
Sox1P53783 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox1P53783 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sox1P53783 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox1P53783 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox1P53783 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox1P53783 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox1P53783 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox1P53783 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox1P53783 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox1P53783 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox1P53783 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.46□□□□□ -0.58
Sox1P53783 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Sox1P53783 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.46□□□□□ -0.58
Sox1P53783 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Sox1P53783 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox1P53783 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox1P53783 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.45□□□□□ -0.58
Sox1P53783 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox1P53783 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox1P53783 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox1P53783 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox1P53783 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Sox1P53783 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms