Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Gm13700-201ENSMUST00000118624 1128 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Gm13688-201ENSMUST00000121557 608 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC16.93■□□□□ 0.3
Cux1P53564 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Gm26208-201ENSMUST00000158677 124 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Gm6216-201ENSMUST00000182390 687 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Gm44236-201ENSMUST00000204492 513 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC16.93■□□□□ 0.3
Cux1P53564 Gm35850-202ENSMUST00000211705 2120 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC16.93■□□□□ 0.3
Cux1P53564 AC102523.1-201ENSMUST00000228706 1144 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Atf7-201ENSMUST00000096143 390 ntBASIC16.93■□□□□ 0.3
Cux1P53564 AC153380.1-201ENSMUST00000214959 2364 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cux1P53564 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC16.93■□□□□ 0.3
Cux1P53564 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Gm8968-201ENSMUST00000199133 1303 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Gm38111-201ENSMUST00000194817 2741 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cux1P53564 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC16.93■□□□□ 0.3
Cux1P53564 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Cux1P53564 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Gm5697-201ENSMUST00000122295 2482 ntBASIC16.92■□□□□ 0.3
Cux1P53564 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cux1P53564 Gm13326-201ENSMUST00000118730 1011 ntBASIC16.92■□□□□ 0.3
Cux1P53564 Gm14639-201ENSMUST00000120850 866 ntBASIC16.92■□□□□ 0.3
Cux1P53564 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC16.92■□□□□ 0.3
Cux1P53564 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Cux1P53564 Gm5801-201ENSMUST00000182247 780 ntBASIC16.92■□□□□ 0.3
Cux1P53564 Gm17944-201ENSMUST00000186351 643 ntBASIC16.92■□□□□ 0.3
Cux1P53564 Gm43106-201ENSMUST00000199485 637 ntBASIC16.92■□□□□ 0.3
Cux1P53564 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Gm45090-201ENSMUST00000208775 1148 ntBASIC16.92■□□□□ 0.3
Cux1P53564 AC154461.1-201ENSMUST00000224207 1005 ntBASIC16.92■□□□□ 0.3
Cux1P53564 AC187103.3-201ENSMUST00000225725 646 ntBASIC16.92■□□□□ 0.3
Cux1P53564 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC16.92■□□□□ 0.3
Cux1P53564 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cux1P53564 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC16.92■□□□□ 0.3
Cux1P53564 AC149588.2-201ENSMUST00000228182 1859 ntBASIC16.92■□□□□ 0.3
Cux1P53564 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cux1P53564 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cux1P53564 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Cux1P53564 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cux1P53564 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cux1P53564 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC16.91■□□□□ 0.3
Cux1P53564 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC16.91■□□□□ 0.3
Cux1P53564 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC16.91■□□□□ 0.3
Cux1P53564 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC16.91■□□□□ 0.3
Cux1P53564 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC16.91■□□□□ 0.3
Cux1P53564 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC16.91■□□□□ 0.3
Cux1P53564 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cux1P53564 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cux1P53564 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cux1P53564 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 AC107763.1-201ENSMUST00000226082 1365 ntBASIC16.91■□□□□ 0.3
Cux1P53564 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cux1P53564 AC163638.2-201ENSMUST00000224920 827 ntBASIC16.91■□□□□ 0.3
Cux1P53564 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms