Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.03□□□□□ -0.64
Pdx1P52946 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.03□□□□□ -0.64
Pdx1P52946 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.03□□□□□ -0.64
Pdx1P52946 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Pdx1P52946 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pdx1P52946 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pdx1P52946 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pdx1P52946 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pdx1P52946 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.03□□□□□ -0.64
Pdx1P52946 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Pdx1P52946 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pdx1P52946 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.03□□□□□ -0.64
Pdx1P52946 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.03□□□□□ -0.64
Pdx1P52946 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pdx1P52946 Mir7076-201ENSMUST00000183519 74 ntBASIC11.03□□□□□ -0.64
Pdx1P52946 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.03□□□□□ -0.64
Pdx1P52946 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Gm18561-201ENSMUST00000206027 804 ntBASIC11.03□□□□□ -0.64
Pdx1P52946 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.03□□□□□ -0.64
Pdx1P52946 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.03□□□□□ -0.64
Pdx1P52946 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.03□□□□□ -0.64
Pdx1P52946 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pdx1P52946 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pdx1P52946 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdx1P52946 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pdx1P52946 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pdx1P52946 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pdx1P52946 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pdx1P52946 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pdx1P52946 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pdx1P52946 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pdx1P52946 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pdx1P52946 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pdx1P52946 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Pdx1P52946 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Pdx1P52946 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Gm11667-201ENSMUST00000119828 486 ntBASIC11.02□□□□□ -0.65
Pdx1P52946 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.02□□□□□ -0.65
Pdx1P52946 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pdx1P52946 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Pdx1P52946 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.02□□□□□ -0.65
Pdx1P52946 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.02□□□□□ -0.65
Pdx1P52946 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Pdx1P52946 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.02□□□□□ -0.65
Pdx1P52946 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pdx1P52946 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Gm28388-201ENSMUST00000186262 437 ntBASIC11.02□□□□□ -0.65
Pdx1P52946 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.02□□□□□ -0.65
Pdx1P52946 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.02□□□□□ -0.65
Pdx1P52946 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.02□□□□□ -0.65
Pdx1P52946 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Pdx1P52946 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.02□□□□□ -0.65
Pdx1P52946 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.02□□□□□ -0.65
Pdx1P52946 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.02□□□□□ -0.65
Pdx1P52946 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pdx1P52946 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pdx1P52946 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pdx1P52946 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pdx1P52946 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdx1P52946 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdx1P52946 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms