Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ptx3P48759 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ptx3P48759 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ptx3P48759 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Ptx3P48759 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ptx3P48759 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ptx3P48759 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ptx3P48759 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ptx3P48759 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ptx3P48759 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.48□□□□□ -0.73
Ptx3P48759 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.48□□□□□ -0.73
Ptx3P48759 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Gm25063-201ENSMUST00000104666 94 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Gm15528-201ENSMUST00000117821 864 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Gm13117-201ENSMUST00000120894 691 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Gm10169-201ENSMUST00000121822 348 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Olfml3-204ENSMUST00000169286 874 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.47□□□□□ -0.73
Ptx3P48759 Gm21778-201ENSMUST00000178779 471 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Gm5100-201ENSMUST00000195631 589 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Gm43002-201ENSMUST00000200310 155 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Gm18561-201ENSMUST00000206027 804 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.47□□□□□ -0.73
Ptx3P48759 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Ptx3P48759 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.47□□□□□ -0.73
Ptx3P48759 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ptx3P48759 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ptx3P48759 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.46□□□□□ -0.73
Ptx3P48759 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.46□□□□□ -0.73
Ptx3P48759 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ptx3P48759 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.46□□□□□ -0.73
Ptx3P48759 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.46□□□□□ -0.73
Ptx3P48759 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.46□□□□□ -0.73
Ptx3P48759 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Gm29410-201ENSMUST00000188383 694 ntBASIC10.46□□□□□ -0.73
Ptx3P48759 Gm37028-201ENSMUST00000194276 107 ntBASIC10.46□□□□□ -0.73
Ptx3P48759 Gm5298-201ENSMUST00000201122 892 ntBASIC10.46□□□□□ -0.73
Ptx3P48759 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.46□□□□□ -0.73
Ptx3P48759 Gm3793-201ENSMUST00000204973 672 ntBASIC10.46□□□□□ -0.73
Ptx3P48759 Gm19091-201ENSMUST00000208120 978 ntBASIC10.46□□□□□ -0.73
Ptx3P48759 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ptx3P48759 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ptx3P48759 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ptx3P48759 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ptx3P48759 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.46□□□□□ -0.73
Ptx3P48759 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Ptx3P48759 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ptx3P48759 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ptx3P48759 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Ptx3P48759 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ptx3P48759 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ptx3P48759 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ptx3P48759 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ptx3P48759 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Ptx3P48759 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ptx3P48759 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms