Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.74□□□□□ -0.69
Prox1P48437 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.74□□□□□ -0.69
Prox1P48437 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
Prox1P48437 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 Gm38117-201ENSMUST00000194653 939 ntBASIC10.74□□□□□ -0.69
Prox1P48437 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Prox1P48437 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.74□□□□□ -0.69
Prox1P48437 Gm4157-201ENSMUST00000211647 679 ntBASIC10.74□□□□□ -0.69
Prox1P48437 Gm17827-201ENSMUST00000211825 742 ntBASIC10.74□□□□□ -0.69
Prox1P48437 Gm5363-201ENSMUST00000211927 938 ntBASIC10.74□□□□□ -0.69
Prox1P48437 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.74□□□□□ -0.69
Prox1P48437 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Prox1P48437 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Prox1P48437 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Prox1P48437 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Prox1P48437 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Prox1P48437 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.74□□□□□ -0.69
Prox1P48437 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Prox1P48437 Gm3329-201ENSMUST00000159873 556 ntBASIC10.73□□□□□ -0.69
Prox1P48437 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Gm2383-201ENSMUST00000181461 807 ntBASIC10.73□□□□□ -0.69
Prox1P48437 Mir8093-201ENSMUST00000185043 137 ntBASIC10.73□□□□□ -0.69
Prox1P48437 Gm5982-201ENSMUST00000196234 512 ntBASIC10.73□□□□□ -0.69
Prox1P48437 Gm43184-201ENSMUST00000197247 542 ntBASIC10.73□□□□□ -0.69
Prox1P48437 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.73□□□□□ -0.69
Prox1P48437 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.73□□□□□ -0.69
Prox1P48437 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.73□□□□□ -0.69
Prox1P48437 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.73□□□□□ -0.69
Prox1P48437 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.73□□□□□ -0.69
Prox1P48437 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prox1P48437 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Prox1P48437 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.72□□□□□ -0.69
Prox1P48437 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.72□□□□□ -0.69
Prox1P48437 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Prox1P48437 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Gm8343-201ENSMUST00000182705 994 ntBASIC10.72□□□□□ -0.69
Prox1P48437 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.72□□□□□ -0.69
Prox1P48437 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms