Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.86□□□□□ -0.67
Rph3aP47708 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.86□□□□□ -0.67
Rph3aP47708 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Rph3aP47708 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.86□□□□□ -0.67
Rph3aP47708 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Gm22846-201ENSMUST00000157706 270 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.86□□□□□ -0.67
Rph3aP47708 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.86□□□□□ -0.67
Rph3aP47708 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Gm17825-201ENSMUST00000206836 794 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rph3aP47708 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Rph3aP47708 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC10.86□□□□□ -0.67
Rph3aP47708 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Rph3aP47708 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.86□□□□□ -0.67
Rph3aP47708 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rph3aP47708 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Rph3aP47708 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Rph3aP47708 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 Gm15615-201ENSMUST00000118876 198 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.85□□□□□ -0.67
Rph3aP47708 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.85□□□□□ -0.67
Rph3aP47708 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Gm21092-201ENSMUST00000178995 955 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.85□□□□□ -0.67
Rph3aP47708 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rph3aP47708 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.85□□□□□ -0.67
Rph3aP47708 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rph3aP47708 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rph3aP47708 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.85□□□□□ -0.67
Rph3aP47708 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rph3aP47708 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC10.84□□□□□ -0.67
Rph3aP47708 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rph3aP47708 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.84□□□□□ -0.67
Rph3aP47708 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms