Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm25554-201ENSMUST00000158075 113 ntBASIC11.06□□□□□ -0.64
Sox18P43680 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.06□□□□□ -0.64
Sox18P43680 Gm9625-201ENSMUST00000180422 955 ntBASIC11.06□□□□□ -0.64
Sox18P43680 Gm8756-201ENSMUST00000183250 929 ntBASIC11.06□□□□□ -0.64
Sox18P43680 Gm4034-201ENSMUST00000187674 480 ntBASIC11.06□□□□□ -0.64
Sox18P43680 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.06□□□□□ -0.64
Sox18P43680 Gm18382-201ENSMUST00000194394 582 ntBASIC11.06□□□□□ -0.64
Sox18P43680 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.06□□□□□ -0.64
Sox18P43680 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 AC154361.1-201ENSMUST00000225694 745 ntBASIC11.06□□□□□ -0.64
Sox18P43680 AC158142.3-201ENSMUST00000226230 675 ntBASIC11.06□□□□□ -0.64
Sox18P43680 AC132918.1-201ENSMUST00000227877 925 ntBASIC11.06□□□□□ -0.64
Sox18P43680 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
Sox18P43680 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox18P43680 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Sox18P43680 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox18P43680 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sox18P43680 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Matn2-203ENSMUST00000226766 3252 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox18P43680 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox18P43680 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox18P43680 Rubie-203ENSMUST00000227803 2430 ntBASIC11.05□□□□□ -0.64
Sox18P43680 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Gm15103-201ENSMUST00000119893 871 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Gm15610-201ENSMUST00000120584 195 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.05□□□□□ -0.64
Sox18P43680 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox18P43680 Gm28934-201ENSMUST00000186491 346 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox18P43680 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox18P43680 Gm34379-201ENSMUST00000195036 290 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Gm8869-201ENSMUST00000195222 947 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Gm44216-201ENSMUST00000203942 157 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Sox18P43680 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox18P43680 Gm18026-201ENSMUST00000222789 727 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sox18P43680 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC11.05□□□□□ -0.64
Sox18P43680 Mir326-201ENSMUST00000083637 95 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.05□□□□□ -0.64
Sox18P43680 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox18P43680 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Gm44441-201ENSMUST00000203642 2475 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Sox18P43680 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sox18P43680 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms