Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
HttP42859 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HttP42859 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
HttP42859 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC11.46□□□□□ -0.57
HttP42859 Gm19566-201ENSMUST00000199576 610 ntBASIC11.46□□□□□ -0.57
HttP42859 Arl15-202ENSMUST00000224068 1002 ntBASIC11.46□□□□□ -0.57
HttP42859 n-R5s5-201ENSMUST00000083134 119 ntBASIC11.46□□□□□ -0.57
HttP42859 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
HttP42859 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC11.46□□□□□ -0.57
HttP42859 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Gm38309-201ENSMUST00000192063 1518 ntBASIC11.46□□□□□ -0.57
HttP42859 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC11.46□□□□□ -0.57
HttP42859 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.46□□□□□ -0.57
HttP42859 Gm11771-201ENSMUST00000118124 732 ntBASIC11.46□□□□□ -0.57
HttP42859 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC11.46□□□□□ -0.57
HttP42859 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC11.46□□□□□ -0.57
HttP42859 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC11.46□□□□□ -0.57
HttP42859 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC11.46□□□□□ -0.57
HttP42859 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.46□□□□□ -0.57
HttP42859 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC11.46□□□□□ -0.57
HttP42859 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC11.46□□□□□ -0.57
HttP42859 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HttP42859 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.46□□□□□ -0.57
HttP42859 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
HttP42859 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.46□□□□□ -0.58
HttP42859 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HttP42859 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HttP42859 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HttP42859 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HttP42859 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HttP42859 Gm25561-201ENSMUST00000104607 125 ntBASIC11.46□□□□□ -0.58
HttP42859 Gm11686-201ENSMUST00000122397 333 ntBASIC11.46□□□□□ -0.58
HttP42859 Gm14323-201ENSMUST00000122418 627 ntBASIC11.46□□□□□ -0.58
HttP42859 AC154643.1-201ENSMUST00000225643 625 ntBASIC11.46□□□□□ -0.58
HttP42859 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HttP42859 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HttP42859 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
HttP42859 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.45□□□□□ -0.58
HttP42859 Gm26208-201ENSMUST00000158677 124 ntBASIC11.45□□□□□ -0.58
HttP42859 Mir5108-201ENSMUST00000175276 85 ntBASIC11.45□□□□□ -0.58
HttP42859 AC153948.2-201ENSMUST00000218112 505 ntBASIC11.45□□□□□ -0.58
HttP42859 Olfr1419-201ENSMUST00000087857 1160 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
HttP42859 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
HttP42859 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HttP42859 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.45□□□□□ -0.58
HttP42859 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.45□□□□□ -0.58
HttP42859 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HttP42859 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HttP42859 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC11.45□□□□□ -0.58
HttP42859 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
HttP42859 Gm29272-201ENSMUST00000185476 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm21919-201ENSMUST00000185653 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm28446-201ENSMUST00000186508 694 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm28680-201ENSMUST00000186743 480 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm21824-201ENSMUST00000186810 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm21862-201ENSMUST00000186957 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm21796-201ENSMUST00000187116 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm21795-201ENSMUST00000187263 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm28814-201ENSMUST00000187334 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm21720-201ENSMUST00000187428 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm20827-201ENSMUST00000187928 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm21766-201ENSMUST00000187962 696 ntBASIC11.45□□□□□ -0.58
HttP42859 Gm21837-201ENSMUST00000188117 696 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms