Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Cd28P31041 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.79□□□□□ -0.84
Cd28P31041 Gm14726-201ENSMUST00000120623 896 ntBASIC9.79□□□□□ -0.84
Cd28P31041 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.79□□□□□ -0.84
Cd28P31041 Gm11424-201ENSMUST00000121929 829 ntBASIC9.79□□□□□ -0.84
Cd28P31041 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.79□□□□□ -0.84
Cd28P31041 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.79□□□□□ -0.84
Cd28P31041 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.79□□□□□ -0.84
Cd28P31041 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Cd28P31041 Gm2991-201ENSMUST00000173338 480 ntBASIC9.79□□□□□ -0.84
Cd28P31041 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Gm28686-201ENSMUST00000187404 609 ntBASIC9.79□□□□□ -0.84
Cd28P31041 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.79□□□□□ -0.84
Cd28P31041 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Cd28P31041 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Cd28P31041 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Cd28P31041 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC9.79□□□□□ -0.84
Cd28P31041 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Cd28P31041 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Cd28P31041 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Cd28P31041 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.79□□□□□ -0.84
Cd28P31041 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cd28P31041 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cd28P31041 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cd28P31041 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.78□□□□□ -0.84
Cd28P31041 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Cd28P31041 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Gm13296-201ENSMUST00000117854 997 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cd28P31041 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cd28P31041 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Gm27572-201ENSMUST00000183702 255 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Gm6621-201ENSMUST00000193251 772 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.78□□□□□ -0.84
Cd28P31041 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.78□□□□□ -0.84
Cd28P31041 Gm18935-201ENSMUST00000212692 664 ntBASIC9.78□□□□□ -0.84
Cd28P31041 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.78□□□□□ -0.84
Cd28P31041 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cd28P31041 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.78□□□□□ -0.84
Cd28P31041 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.78□□□□□ -0.84
Cd28P31041 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.78□□□□□ -0.84
Cd28P31041 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cd28P31041 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cd28P31041 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cd28P31041 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Cd28P31041 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cd28P31041 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cd28P31041 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cd28P31041 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cd28P31041 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cd28P31041 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.77□□□□□ -0.85
Cd28P31041 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cd28P31041 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cd28P31041 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.77□□□□□ -0.85
Cd28P31041 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Cd28P31041 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Cd28P31041 Gm13829-201ENSMUST00000119600 138 ntBASIC9.77□□□□□ -0.85
Cd28P31041 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cd28P31041 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms