Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm26134-201ENSMUST00000178484 110 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm9081-201ENSMUST00000182346 991 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm29155-201ENSMUST00000185910 269 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.31□□□□□ -0.92
Col8a2P25318 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
Col8a2P25318 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC9.31□□□□□ -0.92
Col8a2P25318 AC154184.3-201ENSMUST00000225620 1090 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 AC099645.1-201ENSMUST00000226476 1105 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm8420-201ENSMUST00000097103 598 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.31□□□□□ -0.92
Col8a2P25318 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.31□□□□□ -0.92
Col8a2P25318 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Col8a2P25318 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.31□□□□□ -0.92
Col8a2P25318 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.31□□□□□ -0.92
Col8a2P25318 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col8a2P25318 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Col8a2P25318 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Col8a2P25318 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Col8a2P25318 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.3□□□□□ -0.92
Col8a2P25318 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Gm11619-201ENSMUST00000117474 237 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 Gm14213-201ENSMUST00000119778 768 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 Gm15782-201ENSMUST00000121073 445 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.3□□□□□ -0.92
Col8a2P25318 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Gm22379-201ENSMUST00000157480 131 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.3□□□□□ -0.92
Col8a2P25318 Gm26976-201ENSMUST00000182929 908 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 Gm37365-201ENSMUST00000193109 409 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.3□□□□□ -0.92
Col8a2P25318 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC9.3□□□□□ -0.92
Col8a2P25318 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 CT025551.1-201ENSMUST00000223996 692 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Col8a2P25318 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Col8a2P25318 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Col8a2P25318 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Col8a2P25318 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col8a2P25318 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.3□□□□□ -0.92
Col8a2P25318 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms