Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm26875-201ENSMUST00000181006 950 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm26943-201ENSMUST00000182295 957 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.97□□□□□ -0.33
Col1a1P11087 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.97□□□□□ -0.33
Col1a1P11087 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm7242-201ENSMUST00000221134 705 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm10238-201ENSMUST00000089689 408 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.97□□□□□ -0.33
Col1a1P11087 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col1a1P11087 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.97□□□□□ -0.33
Col1a1P11087 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm14639-201ENSMUST00000120850 866 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm14176-201ENSMUST00000121302 477 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm13857-201ENSMUST00000139645 173 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm6686-201ENSMUST00000178455 258 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.97□□□□□ -0.33
Col1a1P11087 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Gm38038-201ENSMUST00000193803 259 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm43117-201ENSMUST00000198531 379 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm5040-201ENSMUST00000218609 800 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Gm22341-201ENSMUST00000083775 129 ntBASIC12.97□□□□□ -0.33
Col1a1P11087 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col1a1P11087 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col1a1P11087 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col1a1P11087 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col1a1P11087 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.96□□□□□ -0.33
Col1a1P11087 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col1a1P11087 Gm8725-201ENSMUST00000221829 1333 ntBASIC12.96□□□□□ -0.33
Col1a1P11087 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col1a1P11087 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col1a1P11087 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col1a1P11087 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col1a1P11087 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col1a1P11087 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.96□□□□□ -0.34
Col1a1P11087 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.96□□□□□ -0.34
Col1a1P11087 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col1a1P11087 Gm5274-201ENSMUST00000182641 1003 ntBASIC12.96□□□□□ -0.34
Col1a1P11087 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col1a1P11087 Gm37597-201ENSMUST00000191853 382 ntBASIC12.96□□□□□ -0.34
Col1a1P11087 Gm43097-201ENSMUST00000196867 151 ntBASIC12.96□□□□□ -0.34
Col1a1P11087 Gm42803-201ENSMUST00000201051 451 ntBASIC12.96□□□□□ -0.34
Col1a1P11087 Gm18256-201ENSMUST00000209087 907 ntBASIC12.96□□□□□ -0.34
Col1a1P11087 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.96□□□□□ -0.34
Col1a1P11087 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.96□□□□□ -0.34
Col1a1P11087 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.96□□□□□ -0.34
Col1a1P11087 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.96□□□□□ -0.34
Col1a1P11087 AC154806.7-201ENSMUST00000227998 202 ntBASIC12.96□□□□□ -0.34
Col1a1P11087 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col1a1P11087 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Col1a1P11087 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col1a1P11087 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.96□□□□□ -0.34
Col1a1P11087 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col1a1P11087 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col1a1P11087 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col1a1P11087 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col1a1P11087 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col1a1P11087 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col1a1P11087 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.95□□□□□ -0.34
Col1a1P11087 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC12.95□□□□□ -0.34
Col1a1P11087 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col1a1P11087 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms