Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Hoxb3P09026 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb3P09026 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm10807-201ENSMUST00000177134 795 ntBASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC11.46□□□□□ -0.57
Hoxb3P09026 Gm37981-201ENSMUST00000194280 535 ntBASIC11.46□□□□□ -0.57
Hoxb3P09026 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Hoxb3P09026 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC11.46□□□□□ -0.57
Hoxb3P09026 AC132918.1-201ENSMUST00000227877 925 ntBASIC11.46□□□□□ -0.57
Hoxb3P09026 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hoxb3P09026 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hoxb3P09026 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Hoxb3P09026 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxb3P09026 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Hoxb3P09026 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Hoxb3P09026 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Hoxb3P09026 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.46□□□□□ -0.58
Hoxb3P09026 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hoxb3P09026 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm11342-203ENSMUST00000224879 1324 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Mir598-201ENSMUST00000102094 79 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm23769-201ENSMUST00000104441 121 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm13094-201ENSMUST00000117930 409 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm14942-201ENSMUST00000119642 336 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm26931-201ENSMUST00000182273 609 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm28064-201ENSMUST00000185639 858 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm28195-201ENSMUST00000186992 372 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm37337-201ENSMUST00000192601 993 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm43726-201ENSMUST00000199110 775 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm45258-201ENSMUST00000210042 853 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm34165-201ENSMUST00000222012 1174 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.45□□□□□ -0.58
Hoxb3P09026 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms