Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm13316-201ENSMUST00000140537 691 ntBASIC8.14□□□□□ -1.11
TcraP01849 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Gm26956-201ENSMUST00000182176 986 ntBASIC8.14□□□□□ -1.11
TcraP01849 Gm9192-201ENSMUST00000183221 985 ntBASIC8.14□□□□□ -1.11
TcraP01849 Gm27572-201ENSMUST00000183702 255 ntBASIC8.14□□□□□ -1.11
TcraP01849 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC8.14□□□□□ -1.11
TcraP01849 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Gm19963-201ENSMUST00000208413 1255 ntBASIC8.14□□□□□ -1.11
TcraP01849 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Gm7183-201ENSMUST00000213870 1005 ntBASIC8.14□□□□□ -1.11
TcraP01849 Gm19994-201ENSMUST00000217086 586 ntBASIC8.14□□□□□ -1.11
TcraP01849 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC8.14□□□□□ -1.11
TcraP01849 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 AC133598.1-201ENSMUST00000224327 660 ntBASIC8.14□□□□□ -1.11
TcraP01849 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC8.14□□□□□ -1.11
TcraP01849 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Gm44573-201ENSMUST00000191753 2370 ntBASIC8.14□□□□□ -1.11
TcraP01849 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Gm6714-201ENSMUST00000218677 2330 ntBASIC8.14□□□□□ -1.11
TcraP01849 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC8.14□□□□□ -1.11
TcraP01849 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TcraP01849 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Gm4366-201ENSMUST00000201488 1342 ntBASIC8.13□□□□□ -1.11
TcraP01849 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
TcraP01849 Gm7722-201ENSMUST00000120646 741 ntBASIC8.13□□□□□ -1.11
TcraP01849 Gm12164-201ENSMUST00000121695 551 ntBASIC8.13□□□□□ -1.11
TcraP01849 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC8.13□□□□□ -1.11
TcraP01849 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC8.13□□□□□ -1.11
TcraP01849 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC8.13□□□□□ -1.11
TcraP01849 Gm25043-201ENSMUST00000158604 212 ntBASIC8.13□□□□□ -1.11
TcraP01849 Gm17420-201ENSMUST00000164753 153 ntBASIC8.13□□□□□ -1.11
TcraP01849 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
TcraP01849 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC8.13□□□□□ -1.11
TcraP01849 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TcraP01849 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC8.13□□□□□ -1.11
TcraP01849 Gm9004-201ENSMUST00000218739 1222 ntBASIC8.13□□□□□ -1.11
TcraP01849 AC166349.1-201ENSMUST00000220866 695 ntBASIC8.13□□□□□ -1.11
TcraP01849 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Gm9996-201ENSMUST00000070359 913 ntBASIC8.13□□□□□ -1.11
TcraP01849 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TcraP01849 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC8.13□□□□□ -1.11
TcraP01849 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms