Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.52□□□□□ -0.57
AlyrefO08583 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
AlyrefO08583 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
AlyrefO08583 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
AlyrefO08583 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.51□□□□□ -0.57
AlyrefO08583 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
AlyrefO08583 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.51□□□□□ -0.57
AlyrefO08583 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm6158-201ENSMUST00000109467 904 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm14497-201ENSMUST00000119537 580 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Gm9440-201ENSMUST00000119667 539 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm4310-201ENSMUST00000177847 889 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Gm6946-201ENSMUST00000182237 987 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Gm7572-201ENSMUST00000182616 766 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Gm27444-201ENSMUST00000184157 137 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm6649-201ENSMUST00000199743 1165 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.51□□□□□ -0.57
AlyrefO08583 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm7727-201ENSMUST00000219830 671 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.51□□□□□ -0.57
AlyrefO08583 CT009495.1-201ENSMUST00000224221 862 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 CT025618.1-201ENSMUST00000227409 1279 ntBASIC11.51□□□□□ -0.57
AlyrefO08583 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
AlyrefO08583 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.51□□□□□ -0.57
AlyrefO08583 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
AlyrefO08583 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.51□□□□□ -0.57
AlyrefO08583 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
AlyrefO08583 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.51□□□□□ -0.57
AlyrefO08583 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
AlyrefO08583 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
AlyrefO08583 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
AlyrefO08583 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.5□□□□□ -0.57
AlyrefO08583 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.5□□□□□ -0.57
AlyrefO08583 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.5□□□□□ -0.57
AlyrefO08583 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Gm14165-201ENSMUST00000121456 952 ntBASIC11.5□□□□□ -0.57
AlyrefO08583 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.5□□□□□ -0.57
AlyrefO08583 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
AlyrefO08583 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
AlyrefO08583 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.5□□□□□ -0.57
AlyrefO08583 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.5□□□□□ -0.57
AlyrefO08583 Gm27149-201ENSMUST00000184716 1266 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms