Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm25076-201ENSMUST00000104098 132 ntBASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm14942-201ENSMUST00000119642 336 ntBASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.37□□□□□ -0.91
Usf3B2RUQ2 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usf3B2RUQ2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm15003-201ENSMUST00000118884 446 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm37981-201ENSMUST00000194280 535 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm42816-201ENSMUST00000198433 325 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm7504-201ENSMUST00000201449 424 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm12030-201ENSMUST00000121917 223 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 n-R5s84-201ENSMUST00000122591 109 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Mir6407-201ENSMUST00000184510 101 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm3017-201ENSMUST00000203603 1126 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 CT030135.2-201ENSMUST00000225255 893 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usf3B2RUQ2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms