Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm44304-201ENSMUST00000200509 145 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm42710-201ENSMUST00000200608 985 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm16480-201ENSMUST00000120439 832 ntBASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm14699-201ENSMUST00000122340 228 ntBASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm28391-201ENSMUST00000185202 379 ntBASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm18443-201ENSMUST00000185358 556 ntBASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm29528-201ENSMUST00000186699 379 ntBASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm29526-201ENSMUST00000187217 379 ntBASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col4a6B1AVK5 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.28□□□□□ -0.6
Col4a6B1AVK5 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gm22876-201ENSMUST00000175450 298 ntBASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col4a6B1AVK5 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col4a6B1AVK5 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms