Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Gm2875-201ENSMUST00000211333 360 ntBASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2aQ9DB34 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm14942-201ENSMUST00000119642 336 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm24992-201ENSMUST00000157412 130 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm17877-201ENSMUST00000192578 814 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Gm42657-201ENSMUST00000201746 211 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2aQ9DB34 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chmp2aQ9DB34 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms