Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm2991-201ENSMUST00000173338 480 ntBASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Gm36943-201ENSMUST00000194422 282 ntBASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Gm38117-201ENSMUST00000194653 939 ntBASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Gm31256-201ENSMUST00000194705 506 ntBASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Gm43758-201ENSMUST00000199500 367 ntBASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.37□□□□□ -0.75
Trim13Q9CYB0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.37□□□□□ -0.75
Trim13Q9CYB0 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm14109-201ENSMUST00000118814 309 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm14726-201ENSMUST00000120623 896 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm4310-201ENSMUST00000177847 889 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Mir6420-201ENSMUST00000185032 102 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm8885-201ENSMUST00000189382 598 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm32999-201ENSMUST00000192693 562 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm38341-201ENSMUST00000195357 515 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm44364-201ENSMUST00000198368 141 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm7783-201ENSMUST00000204795 781 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm7940-201ENSMUST00000218195 769 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 AC114573.1-201ENSMUST00000224120 1210 ntBASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim13Q9CYB0 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trim13Q9CYB0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms