Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gm23563-201ENSMUST00000174900 251 ntBASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 AC120406.1-201ENSMUST00000220362 482 ntBASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 H2-Pb-201ENSMUST00000172731 531 ntBASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Gm30652-201ENSMUST00000199103 430 ntBASIC11.02□□□□□ -0.64
Cdh23Q99PF4 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Gm8615-201ENSMUST00000025307 771 ntBASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Gm38220-201ENSMUST00000195774 1447 ntBASIC11.02□□□□□ -0.64
Cdh23Q99PF4 AU015228-201ENSMUST00000121103 1320 ntBASIC11.02□□□□□ -0.64
Cdh23Q99PF4 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm12499-201ENSMUST00000121961 546 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm25735-201ENSMUST00000175164 215 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm38004-201ENSMUST00000192972 357 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm3889-201ENSMUST00000212467 612 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 AL844586.1-201ENSMUST00000224297 1042 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm22900-201ENSMUST00000104538 130 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm14853-201ENSMUST00000116081 549 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 AC129590.1-201ENSMUST00000225573 852 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Gm8806-201ENSMUST00000120076 1407 ntBASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdh23Q99PF4 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm22751-201ENSMUST00000102077 109 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Mir692-3-201ENSMUST00000102079 109 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Mir692-2-201ENSMUST00000102081 109 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm6141-201ENSMUST00000117181 695 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm23999-201ENSMUST00000158057 104 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Gm6342-201ENSMUST00000204344 766 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 AC108416.3-201ENSMUST00000226148 557 ntBASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh23Q99PF4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms