Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.96□□□□□ -0.82
Thumpd1Q99J36 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Spata33-207ENSMUST00000212760 4074 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gm15276-201ENSMUST00000145953 498 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gm8459-201ENSMUST00000162504 760 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Thumpd1Q99J36 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.94□□□□□ -0.82
Thumpd1Q99J36 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Gm12247-201ENSMUST00000117585 670 ntBASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Thumpd1Q99J36 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms