Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Gm11560-201ENSMUST00000117567 948 ntBASIC11.39□□□□□ -0.59
Lims2Q91XD2 Gm11380-201ENSMUST00000118067 560 ntBASIC11.39□□□□□ -0.59
Lims2Q91XD2 Gm14219-201ENSMUST00000120414 288 ntBASIC11.39□□□□□ -0.59
Lims2Q91XD2 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims2Q91XD2 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lims2Q91XD2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Gm29155-201ENSMUST00000185910 269 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 Gm37365-201ENSMUST00000193109 409 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 Gm43912-201ENSMUST00000204352 538 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.38□□□□□ -0.59
Lims2Q91XD2 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims2Q91XD2 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms