Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.62□□□□□ -0.87
Tram1Q91V04 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tram1Q91V04 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm3096-201ENSMUST00000185770 364 ntBASIC9.61□□□□□ -0.87
Tram1Q91V04 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.61□□□□□ -0.87
Tram1Q91V04 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm38321-201ENSMUST00000195053 235 ntBASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm9794-201ENSMUST00000202370 423 ntBASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm45598-202ENSMUST00000210719 986 ntBASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.61□□□□□ -0.87
Tram1Q91V04 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.61□□□□□ -0.87
Tram1Q91V04 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC9.61□□□□□ -0.87
Tram1Q91V04 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tram1Q91V04 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm12390-201ENSMUST00000117897 397 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.6□□□□□ -0.87
Tram1Q91V04 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm6963-201ENSMUST00000147879 379 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm8343-201ENSMUST00000182705 994 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm37008-201ENSMUST00000195712 319 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm8712-201ENSMUST00000221090 701 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Morn2-202ENSMUST00000227729 656 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm4978-201ENSMUST00000071565 801 ntBASIC9.6□□□□□ -0.87
Tram1Q91V04 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Tram1Q91V04 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tram1Q91V04 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms