Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim60Q8VI40 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.57□□□□□ -0.56
Trim60Q8VI40 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.57□□□□□ -0.56
Trim60Q8VI40 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm8731-201ENSMUST00000118088 412 ntBASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm15549-201ENSMUST00000121595 622 ntBASIC11.57□□□□□ -0.56
Trim60Q8VI40 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.57□□□□□ -0.56
Trim60Q8VI40 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm29199-201ENSMUST00000187766 775 ntBASIC11.57□□□□□ -0.56
Trim60Q8VI40 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.57□□□□□ -0.56
Trim60Q8VI40 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim60Q8VI40 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Snord17-201ENSMUST00000104526 238 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm4294-201ENSMUST00000105169 614 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm15566-201ENSMUST00000121130 590 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm15329-201ENSMUST00000121408 155 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm9540-201ENSMUST00000188230 478 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm37301-201ENSMUST00000195412 568 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm7504-201ENSMUST00000201449 424 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim60Q8VI40 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.56□□□□□ -0.56
Trim60Q8VI40 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms