Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.57□□□□□ -0.56
Rprd1aQ8VDS4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rprd1aQ8VDS4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Gm10263-201ENSMUST00000085163 300 ntBASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rprd1aQ8VDS4 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Gm12208-201ENSMUST00000122004 163 ntBASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Mt1-202ENSMUST00000211807 1085 ntBASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rprd1aQ8VDS4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rprd1aQ8VDS4 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms