Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cchcr1Q8K2I2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gm10774-201ENSMUST00000188689 204 ntBASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gm29067-201ENSMUST00000190821 470 ntBASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gm37246-201ENSMUST00000192665 835 ntBASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gm37981-201ENSMUST00000194280 535 ntBASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cchcr1Q8K2I2 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Gm15615-201ENSMUST00000118876 198 ntBASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Mir433-201ENSMUST00000093564 124 ntBASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC13.21□□□□□ -0.29
Cchcr1Q8K2I2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cchcr1Q8K2I2 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cchcr1Q8K2I2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cchcr1Q8K2I2 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cchcr1Q8K2I2 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.21□□□□□ -0.3
Cchcr1Q8K2I2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC13.21□□□□□ -0.3
Cchcr1Q8K2I2 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cchcr1Q8K2I2 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cchcr1Q8K2I2 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC13.21□□□□□ -0.3
Cchcr1Q8K2I2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cchcr1Q8K2I2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms