Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm13035-201ENSMUST00000117496 342 ntBASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm15207-201ENSMUST00000119259 442 ntBASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm13461-201ENSMUST00000120980 662 ntBASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Gm43378-201ENSMUST00000199336 582 ntBASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.89□□□□□ -0.51
Ccdc87Q8CDL9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Gm11783-201ENSMUST00000119549 885 ntBASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Gm9353-201ENSMUST00000200472 604 ntBASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Gm4978-201ENSMUST00000071565 801 ntBASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc87Q8CDL9 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc87Q8CDL9 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms