Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vps53Q8CCB4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm14071-201ENSMUST00000117817 509 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm13600-201ENSMUST00000117949 744 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm24398-201ENSMUST00000157870 109 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm3329-201ENSMUST00000159873 556 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm12407-201ENSMUST00000180219 324 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm37458-201ENSMUST00000194055 410 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm44158-201ENSMUST00000203881 505 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm6108-201ENSMUST00000208365 367 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps53Q8CCB4 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Gm11783-201ENSMUST00000119549 885 ntBASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Gm18367-201ENSMUST00000176139 600 ntBASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Gm17889-201ENSMUST00000198410 598 ntBASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Gm45594-201ENSMUST00000211717 241 ntBASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.05□□□□□ -0.32
Vps53Q8CCB4 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms