Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rnf170Q8CBG9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm24891-201ENSMUST00000104391 136 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm11500-201ENSMUST00000118237 601 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm12463-201ENSMUST00000118271 849 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm28450-201ENSMUST00000187349 638 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.5□□□□□ -0.89
Rnf170Q8CBG9 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Gm23085-201ENSMUST00000157849 293 ntBASIC9.49□□□□□ -0.89
Rnf170Q8CBG9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms