Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm11500-201ENSMUST00000118237 601 ntBASIC9.18□□□□□ -0.94
Smco3Q8BQM7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Mospd4-201ENSMUST00000180618 576 ntBASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm4607-201ENSMUST00000206649 577 ntBASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm5950-201ENSMUST00000213337 772 ntBASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.18□□□□□ -0.94
Smco3Q8BQM7 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.17□□□□□ -0.94
Smco3Q8BQM7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.17□□□□□ -0.94
Smco3Q8BQM7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms