Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm38314-201ENSMUST00000195709 625 ntBASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm42627-201ENSMUST00000197347 224 ntBASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm43118-201ENSMUST00000199149 775 ntBASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm19309-201ENSMUST00000218295 205 ntBASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Morn2-202ENSMUST00000227729 656 ntBASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm38001-201ENSMUST00000192900 3761 ntBASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rnf220Q6PDX6 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Gm37962-201ENSMUST00000195535 2034 ntBASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.58□□□□□ -0.72
Rnf220Q6PDX6 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm9220-201ENSMUST00000190721 2544 ntBASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm4986-201ENSMUST00000119731 549 ntBASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rnf220Q6PDX6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms