Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 AC166361.2-201ENSMUST00000219269 1415 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm24933-201ENSMUST00000103762 110 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm23252-201ENSMUST00000103776 110 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm11473-201ENSMUST00000118980 359 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm26443-201ENSMUST00000179610 110 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm7833-201ENSMUST00000183288 990 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm42588-201ENSMUST00000200538 1297 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 AC121567.1-201ENSMUST00000227213 842 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Atf7-201ENSMUST00000096143 390 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm5697-201ENSMUST00000122295 2482 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm8482-201ENSMUST00000117972 471 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm13841-201ENSMUST00000118829 483 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm11449-201ENSMUST00000119175 476 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm8210-201ENSMUST00000178557 483 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm15454-201ENSMUST00000179718 483 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Mir8111-201ENSMUST00000184463 137 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm4930-201ENSMUST00000219926 1087 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Gm6344-201ENSMUST00000075962 483 ntBASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Gm45663-201ENSMUST00000210429 1632 ntBASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Gm12337-201ENSMUST00000119634 400 ntBASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Gm26943-201ENSMUST00000182295 957 ntBASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd4Q6PDQ2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd4Q6PDQ2 Gm17836-201ENSMUST00000191976 1302 ntBASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms