Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Krt42Q6IFX2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt42Q6IFX2 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Gm8885-201ENSMUST00000189382 598 ntBASIC11.41□□□□□ -0.58
Krt42Q6IFX2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt42Q6IFX2 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.4□□□□□ -0.58
Krt42Q6IFX2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Gm25148-201ENSMUST00000104611 123 ntBASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Gm10608-202ENSMUST00000213924 676 ntBASIC11.4□□□□□ -0.58
Krt42Q6IFX2 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Krt42Q6IFX2 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Krt42Q6IFX2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Krt42Q6IFX2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.4□□□□□ -0.59
Krt42Q6IFX2 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Krt42Q6IFX2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Krt42Q6IFX2 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.4□□□□□ -0.59
Krt42Q6IFX2 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.4□□□□□ -0.59
Krt42Q6IFX2 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.4□□□□□ -0.59
Krt42Q6IFX2 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.4□□□□□ -0.59
Krt42Q6IFX2 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Gm15370-201ENSMUST00000117158 253 ntBASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Gm15207-201ENSMUST00000119259 442 ntBASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Gm11941-201ENSMUST00000119904 610 ntBASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.39□□□□□ -0.59
Krt42Q6IFX2 Gm8459-201ENSMUST00000162504 760 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms