Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ift88Q61371 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ift88Q61371 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.35□□□□□ -0.43
Ift88Q61371 Mir1896-201ENSMUST00000122641 81 ntBASIC12.35□□□□□ -0.43
Ift88Q61371 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.35□□□□□ -0.43
Ift88Q61371 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.35□□□□□ -0.43
Ift88Q61371 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Gm5733-201ENSMUST00000190232 939 ntBASIC12.35□□□□□ -0.43
Ift88Q61371 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.35□□□□□ -0.43
Ift88Q61371 Gm17825-201ENSMUST00000206836 794 ntBASIC12.35□□□□□ -0.43
Ift88Q61371 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.35□□□□□ -0.43
Ift88Q61371 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.35□□□□□ -0.43
Ift88Q61371 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.35□□□□□ -0.43
Ift88Q61371 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ift88Q61371 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ift88Q61371 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ift88Q61371 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.35□□□□□ -0.43
Ift88Q61371 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.35□□□□□ -0.43
Ift88Q61371 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ift88Q61371 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ift88Q61371 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.34□□□□□ -0.43
Ift88Q61371 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.34□□□□□ -0.43
Ift88Q61371 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ift88Q61371 Gm15566-201ENSMUST00000121130 590 ntBASIC12.34□□□□□ -0.43
Ift88Q61371 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.34□□□□□ -0.43
Ift88Q61371 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.34□□□□□ -0.43
Ift88Q61371 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.34□□□□□ -0.43
Ift88Q61371 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Ift88Q61371 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ift88Q61371 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ift88Q61371 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.34□□□□□ -0.43
Ift88Q61371 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ift88Q61371 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ift88Q61371 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ift88Q61371 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ift88Q61371 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ift88Q61371 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.33□□□□□ -0.44
Ift88Q61371 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ift88Q61371 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.33□□□□□ -0.44
Ift88Q61371 Gm8111-201ENSMUST00000117659 987 ntBASIC12.33□□□□□ -0.44
Ift88Q61371 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.33□□□□□ -0.44
Ift88Q61371 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ift88Q61371 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.33□□□□□ -0.44
Ift88Q61371 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.33□□□□□ -0.44
Ift88Q61371 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.33□□□□□ -0.44
Ift88Q61371 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.33□□□□□ -0.44
Ift88Q61371 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ift88Q61371 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms