Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Syne3Q4FZC9 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Gm22711-201ENSMUST00000116890 133 ntBASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.9□□□□□ -0.5
Syne3Q4FZC9 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Gm37981-201ENSMUST00000194280 535 ntBASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Gm43186-201ENSMUST00000198130 824 ntBASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Gm44008-201ENSMUST00000204345 412 ntBASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Gm9132-201ENSMUST00000210182 832 ntBASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Syne3Q4FZC9 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Syne3Q4FZC9 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Syne3Q4FZC9 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.9□□□□□ -0.51
Syne3Q4FZC9 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Syne3Q4FZC9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Syne3Q4FZC9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Syne3Q4FZC9 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Gm15881-201ENSMUST00000148792 942 ntBASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Gm7504-201ENSMUST00000201449 424 ntBASIC11.89□□□□□ -0.51
Syne3Q4FZC9 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.89□□□□□ -0.51
Syne3Q4FZC9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Syne3Q4FZC9 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.88□□□□□ -0.51
Syne3Q4FZC9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Syne3Q4FZC9 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms