Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 AC154729.1-201ENSMUST00000224481 1501 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm10741-201ENSMUST00000218151 1748 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Rhox4f-201ENSMUST00000115170 948 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Fthl17-ps1-201ENSMUST00000120058 516 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm9556-201ENSMUST00000182938 940 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm6375-201ENSMUST00000205201 1145 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm45510-201ENSMUST00000210059 638 ntTSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 AC131029.2-203ENSMUST00000228116 1244 ntBASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ush2AQ2QI47 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm15285-201ENSMUST00000119271 473 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Dlx1as-203ENSMUST00000140271 700 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Mir6360-201ENSMUST00000184278 126 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Mir7005-201ENSMUST00000185089 69 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm23659-201ENSMUST00000102245 110 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm5244-201ENSMUST00000164001 339 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm7393-201ENSMUST00000172650 739 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Etv3l-201ENSMUST00000193196 325 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Olfr523-201ENSMUST00000055890 1056 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 BC025920-204ENSMUST00000121138 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Nsg2-202ENSMUST00000093219 1974 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm10344-201ENSMUST00000193498 1419 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm37437-201ENSMUST00000194451 1937 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm43972-201ENSMUST00000181398 1467 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm11960-202ENSMUST00000181063 2858 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm43827-201ENSMUST00000200623 1390 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm13160-201ENSMUST00000118441 627 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm15499-201ENSMUST00000141390 422 ntTSL 5 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Mir5114-201ENSMUST00000175574 61 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm9825-201ENSMUST00000178598 843 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm22347-201ENSMUST00000180276 132 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm29164-201ENSMUST00000185454 1024 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm29157-201ENSMUST00000188753 612 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm7631-201ENSMUST00000196935 1100 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm7924-201ENSMUST00000203975 785 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Gm8162-201ENSMUST00000213951 665 ntBASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ush2AQ2QI47 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms