Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Mir1905-201ENSMUST00000122779 82 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Gm37284-201ENSMUST00000193607 539 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.4□□□□□ -0.58
Ebf1Q07802 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.4□□□□□ -0.58
Ebf1Q07802 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf1Q07802 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.59
Ebf1Q07802 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ebf1Q07802 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.4□□□□□ -0.59
Ebf1Q07802 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ebf1Q07802 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ebf1Q07802 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ebf1Q07802 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Ebf1Q07802 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ebf1Q07802 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Ebf1Q07802 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ebf1Q07802 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.39□□□□□ -0.59
Ebf1Q07802 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.39□□□□□ -0.59
Ebf1Q07802 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm14234-201ENSMUST00000119539 845 ntBASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.39□□□□□ -0.59
Ebf1Q07802 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm18776-201ENSMUST00000188833 654 ntBASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf1Q07802 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.39□□□□□ -0.59
Ebf1Q07802 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ebf1Q07802 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.38□□□□□ -0.59
Ebf1Q07802 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Gm38314-201ENSMUST00000195709 625 ntBASIC11.38□□□□□ -0.59
Ebf1Q07802 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf1Q07802 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.38□□□□□ -0.59
Ebf1Q07802 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.38□□□□□ -0.59
Ebf1Q07802 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms