Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Cdx4Q07424 AC131586.1-201ENSMUST00000228844 2964 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC8.7□□□□□ -1.02
Cdx4Q07424 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx4Q07424 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm10548-201ENSMUST00000097631 2629 ntBASIC8.69□□□□□ -1.02
Cdx4Q07424 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm14460-201ENSMUST00000121511 639 ntBASIC8.69□□□□□ -1.02
Cdx4Q07424 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm4726-201ENSMUST00000135604 736 ntBASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm7666-201ENSMUST00000146631 819 ntBASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm6019-201ENSMUST00000148369 736 ntBASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Mir6546-201ENSMUST00000184460 62 ntBASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm18558-201ENSMUST00000186253 1214 ntBASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm43852-201ENSMUST00000202098 917 ntBASIC8.69□□□□□ -1.02
Cdx4Q07424 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm45398-201ENSMUST00000210561 165 ntBASIC8.69□□□□□ -1.02
Cdx4Q07424 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cdx4Q07424 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cdx4Q07424 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx4Q07424 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Gm7967-202ENSMUST00000191042 5042 ntBASIC8.68□□□□□ -1.02
Cdx4Q07424 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Gm8737-201ENSMUST00000122208 642 ntBASIC8.68□□□□□ -1.02
Cdx4Q07424 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx4Q07424 Gm10807-201ENSMUST00000177134 795 ntBASIC8.68□□□□□ -1.02
Cdx4Q07424 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Cdx4Q07424 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC8.68□□□□□ -1.02
Cdx4Q07424 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC8.68□□□□□ -1.02
Cdx4Q07424 Gm45219-201ENSMUST00000205602 465 ntBASIC8.68□□□□□ -1.02
Cdx4Q07424 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms